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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932627.1_cds_XP_016479087.1_70664
CDS Infomation

[gene=LOC107800431] [db_xref=GeneID:107800431] [protein=protein HGH1 homolog isoform X3] [protein_id=XP_016479087.1] [location=join(173082..173135,177145..177267,178597..178794,179266..179344,181480..181628,181892..181936,183593..183724,184000..184113,184219..184266)] [gbkey=CDS]
Sequence

ATGGCAACGGAGCTAGAAGAATTGATTGGCTTTCTCTCTTCCCCTTCCCCTCCAGTGAAA
AAATTAGCGGTTGATATCGTTCGTGATTATACTGGTTCTGAGGATGGCTTGGAATCTCTT
GGAAAGTATTCCACAATTGTGCTTCCCTCTCTGTCACGTCTTCTTGGCGAAAAAAAGGTG
GTTTCTGAACCTGTGGCTCAAGCACTGGTAAATCTGTCACAAAAGCCAGAGTTGGCAGGT
AAGATGGTTGAGATGCATATGGTTAAGACGTCGATGGAGACCCTGTACAAGCAAGATTGT
GAAATCACAACTCTGCTGATTATGCTCCTTGTTAATCTCACACAGCTGGATGCTGGTATT
GATTCTTTGCTTCAGTCTGCAGATGAGAAGATGCATGGCTTATATGTCATGAAGCTTGTG
AGATCATTTTGTTTGTCCTCCGATGAGGGTGAAGGTGATCCCTTTGAACATGTGGCTTCT
GTACTTGTTAACATTTCCAAGAAGGAACTGGGAAGAAAGCTTCTGCTTGATCCAAAACGA
GGCCCTCTAATAAAGCAAATAGTCCAGCAGTTTCATTCTAAGAGCTTGTTGAGAAAGAAA
GGGGTCGCAGGAACCATCCGCAACTGCTGCTTTGAAGCAGAGAGCCAGGTTTATAGTAAG
GAAGACACTCGTAAAATGCCACAGGAGCTTGCAAGTGCACTCTCAATAGAGCGAGAACCT
GTTACTGATCCGGAAATTCGTGTGCAGGCGCTAGAGGCTATTTATTTGCTCATATTACAG
GAAGCAGGCCGAAGAGCATTTTGGTCAGTGAATGGTCCCCGGATATTGCAAGTCGGCTAT
CAAGACGAGGAAGATCCTAAAGCAATGGAAGCGTATGAACGAGCTGGCTCCTTGCTACTT
CAAGAGGGTGGCCTCGATGAAGCAACAGAGACATCATCATAG

Peptide Sequence

PEP ID

XP_016479087.1
PEP Infomation

PREDICTED: protein HGH1 homolog isoform X3 [Nicotiana tabacum]
Sequence

MATELEELIGFLSSPSPPVKKLAVDIVRDYTGSEDGLESLGKYSTIVLPSLSRLLGEKKV
VSEPVAQALVNLSQKPELAGKMVEMHMVKTSMETLYKQDCEITTLLIMLLVNLTQLDAGI
DSLLQSADEKMHGLYVMKLVRSFCLSSDEGEGDPFEHVASVLVNISKKELGRKLLLDPKR
GPLIKQIVQQFHSKSLLRKKGVAGTIRNCCFEAESQVYSKEDTRKMPQELASALSIEREP
VTDPEIRVQALEAIYLLILQEAGRRAFWSVNGPRILQVGYQDEEDPKAMEAYERAGSLLL
QEGGLDEATETSS

Transcript Sequence

Gene sequence data has not been registered.